BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E07SP1|AL430245
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig564 1756 0.0
>3x_Contig564
Length = 2733
Score = 1756 bits (886), Expect = 0.0
Identities = 893/894 (99%), Gaps = 1/894 (0%)
Strand = Plus / Plus
Query: 18 agccagcttcaaccatcttgtcacgaacttcttgagcatattcttggaatttaacaccga 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 agccagcttcaaccatcttgtcacgaacttcttgagcatattcttggaatttaacaccga 91
Query: 78 ctggtacgacaaggatttgacgtggagataaccagaatggccacttaccagcaaagtgct 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 ctggtacgacaaggatttgacgtggagataaccagaatggccacttaccagcaaagtgct 151
Query: 138 ccgtcaagatagcagtcattctttccacagaacctaagatagcacgatgaatcatgaccg 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ccgtcaagatagcagtcattctttccacagaacctaagatagcacgatgaatcatgaccg 211
Query: 198 gtctttcgtaattgtcgctaccttccaattccttggttttgaattccaattcaaatctat 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gtctttcgtaattgtcgctaccttccaattccttggttttgaattccaattcaaatctat 271
Query: 258 ttggtagttggaaatccaattgaatggtagcacattgatgccatctctttagggcatcgg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttggtagttggaaatccaattgaatggtagcacattgatgccatctctttagggcatcgg 331
Query: 318 aaatcatgatatcgatctttggaccgtagaaagcaccatcacctggatttaattcccagt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaatcatgatatcgatctttggaccgtagaaagcaccatcacctggatttaattcccagt 391
Query: 378 taccaccccac-ttcttcaaagcagtttcaagtttggattccgcattgttccaggtctct 436
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 taccaccccaccttcttcaaagcagtttcaagtttggattccgcattgttccaggtctct 451
Query: 437 agttcaccaacgtatttttctggtctagtggatagttccatcttgaattcgaaaccgaac 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agttcaccaacgtatttttctggtctagtggatagttccatcttgaattcgaaaccgaac 511
Query: 497 acaccataaacgtattttaagaaatcgaaaatgttagcgatttcattttcgatttggtct 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 acaccataaacgtattttaagaaatcgaaaatgttagcgatttcattttcgatttggtct 571
Query: 557 tgggtacagaaaatgtgagcatcgtcttgttggaatcttcttacacgagtcaaaccagac 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgggtacagaaaatgtgagcatcgtcttgttggaatcttcttacacgagtcaaaccagac 631
Query: 617 aaagcaccggagaattcgtttctgtgaatgacaccgaaatcagcaactctccatggcaat 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aaagcaccggagaattcgtttctgtgaatgacaccgaaatcagcaactctccatggcaat 691
Query: 677 tctctataagaacgttcacgagccttaaacattaaacaatgaccgggacagttcattggt 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tctctataagaacgttcacgagccttaaacattaaacaatgaccgggacagttcattggt 751
Query: 737 ttcaaaccaaatgtttccttttcaacttcgaaggagaacatattttctttgtagttagcc 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ttcaaaccaaatgtttccttttcaacttcgaaggagaacatattttctttgtagttagcc 811
Query: 797 cagtgaccagaagtttcccacaacttggagttgtacatgtttggagtgataacttcatcg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 cagtgaccagaagtttcccacaacttggagttgtacatgtttggagtgataacttcatcg 871
Query: 857 taacctctcttacggtattcgcttctcaacaaatcaactaaagtgttgtaaatt 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 taacctctcttacggtattcgcttctcaacaaatcaactaaagtgttgtaaatt 925
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7129
Number of Sequences: 1807
Number of extensions: 7129
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)